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SMC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SMC1" - Structural maintenance of chromosomes protein 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1Structural maintenance of chromosomes protein 1 (818 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein 3 (1121 aa)
     
0.999
SCC3
Cohesin complex subunit (1259 aa)
     
  0.997
EDP00838
Cohesin subunit SCC1a (556 aa)
     
  0.989
EDP00909
Cohesin subunit SCC1b (304 aa)
     
  0.988
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
 
 
 
0.973
EDO99556
Predicted protein (1601 aa)
     
  0.970
ESP1
Separase, cell cycle protease (2337 aa)
     
  0.968
STPK11
Serine/threonine protein kinase 11 (363 aa)
     
  0.963
EDP04529
Predicted protein (258 aa)
     
  0.963
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.950
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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