STRINGSTRING
EDO97950 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97950" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97950Predicted protein (65 aa)    
Predicted Functional Partners:
EDO95811
Predicted protein (161 aa)
     
        0.672
EDO95720
Predicted protein (127 aa)
     
        0.657
EDP01228
Predicted protein (839 aa)
     
        0.656
DNL4
DNA ligase IV (831 aa)
     
        0.561
EDP09798
Hypothetical protein (636 aa)
     
        0.516
EDO96319
Predicted protein (232 aa)
     
        0.511
EDP05462
Predicted protein (106 aa)
     
        0.509
EDP01796
Predicted protein (512 aa)
     
        0.505
EDO97545
Predicted protein (299 aa)
     
        0.501
PFK3
Phosphofructokinase (1005 aa)
     
        0.479
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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