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EDO97953 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97953" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97953Predicted protein (215 aa)    
Predicted Functional Partners:
EDP08344
Predicted protein (167 aa)
     
  0.876
EDP01156
Predicted protein (535 aa)
     
  0.848
EDP05450
Global transcription factor (325 aa)
     
  0.828
EDP08033
Predicted protein (358 aa)
     
  0.776
EDP07045
Predicted protein (285 aa)
       
  0.739
EDP05072
Predicted protein (312 aa)
     
  0.713
RPC19
RNA polymerase subunit (99 aa)
         
  0.711
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
       
  0.710
RPB12
Subunit f DNA-directed RNA polymerase (58 aa)
         
  0.701
EDP07490
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (109 aa)
         
  0.700
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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