STRINGSTRING
EDO97964 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97964" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97964Predicted protein (496 aa)    
Predicted Functional Partners:
EDP07162
Predicted protein (766 aa)
     
        0.594
PRKDC
DNA dependent protein kinase catalytic subunit (1431 aa)
     
        0.545
EDO96309
Predicted protein (319 aa)
     
        0.498
EDP02246
Predicted protein (1150 aa)
     
        0.495
EDP09933
Predicted protein (2852 aa)
     
        0.478
EDO98384
Predicted protein (453 aa)
     
        0.477
VPS36
Subunit of ESCRT-II complex (701 aa)
     
        0.476
LSP1
Signal transducer for phototaxis (716 aa)
     
        0.475
EDP04715
Predicted protein (1209 aa)
     
        0.475
EDO98425
Predicted protein (660 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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