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PRPS16 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRPS16" - Plastid ribosomal protein S16 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPS16Plastid ribosomal protein S16 (128 aa)    
Predicted Functional Partners:
rps18
Ribosomal protein S18 (137 aa)
     
  0.993
PRPS5
Plastid ribosomal protein S5 (673 aa)
   
  0.992
RPS5
Ribosomal protein S5 (193 aa)
     
  0.992
rps7
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit (168 aa)
     
  0.992
MRPS9
Mitochondrial ribosomal protein S9 (342 aa)
   
  0.991
rps9
Ribosomal protein S9 (191 aa)
   
  0.991
PRPS15
Plastid ribosomal protein S15 (141 aa)
   
  0.991
MRPS12
Mitochondrial ribosomal protein S12 (137 aa)
   
  0.990
rps12
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity) (133 aa)
   
  0.990
MRPS15
Mitochondrial ribosomal protein S15 (273 aa)
   
  0.989
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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