STRINGSTRING
EDO97979 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97979" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97979Predicted protein (626 aa)    
Predicted Functional Partners:
EDP01779
Predicted protein (1143 aa)
     
 
  0.956
MTR4
DEAD-box family ATP dependent helicase (945 aa)
     
 
  0.938
EDO98561
Predicted protein (300 aa)
     
 
  0.935
EDO98490
Predicted protein (476 aa)
     
 
  0.931
FAP148
Flagellar associated protein (1732 aa)
       
 
  0.929
RNPH1
3’-5’ exoribonuclease PH component of the exosome (245 aa)
     
 
  0.899
CPLD46
DEAD/DEAH-box helicase (485 aa)
     
 
  0.834
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
 
  0.832
RRP46
Exosome complex exonuclease (242 aa)
     
 
  0.777
EDP07268
Amine oxidase family protein (407 aa)
     
        0.703
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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