STRINGSTRING
EDO97987 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97987" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97987Predicted protein (738 aa)    
Predicted Functional Partners:
EDO98779
MRG family protein (207 aa)
     
 
  0.983
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
     
 
  0.964
EDO98539
Histone deacetylase (339 aa)
     
 
  0.926
EDP02327
Histone methyltransferase (1105 aa)
     
 
  0.898
EDP02188
Histone deacetylase (419 aa)
     
 
  0.869
EDO96250
Histone deacetylase (273 aa)
     
 
  0.869
EDP01149
Histone deacetylase (418 aa)
     
 
  0.864
EDO99237
Histone deacetylase (396 aa)
     
 
  0.764
EDP04619
Predicted protein (274 aa)
     
 
  0.764
EDP00245
Histone deacetylase (79 aa)
     
 
  0.746
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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