STRINGSTRING
RNP10 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RNP10" - RNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNP10RNA binding protein (229 aa)    
Predicted Functional Partners:
EDO99837
RNA binding protein (316 aa)
     
  0.835
EDP00496
Predicted protein (178 aa)
     
  0.765
EDO99505
Predicted protein (1212 aa)
     
  0.763
EDP07946
Predicted protein (434 aa)
     
  0.758
EDP06893
Predicted protein (77 aa)
     
  0.758
CGL28
RNA binding protein (464 aa)
     
  0.758
EDP02454
Glycine-rich RNA-binding protein (165 aa)
     
  0.758
EDO99734
Predicted protein (561 aa)
     
  0.758
EDO96956
Predicted protein (632 aa)
     
  0.758
SRP35
SR protein factor (338 aa)
     
  0.747
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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