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EDO98006 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98006" - Nuclear pre-mRNA splicing factor, component of splicing factor 3b in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98006Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1085 aa)    
Predicted Functional Partners:
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
  0.999
EDP03818
Predicted protein (95 aa)
     
  0.997
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
  0.997
EDP00098
Predicted protein (129 aa)
     
  0.997
PRP6
Splicing factor, component of the U4/U6-U5 snRNP complex (947 aa)
     
  0.996
EDP08357
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (396 aa)
     
  0.996
EDO97886
Predicted protein (110 aa)
       
  0.995
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.995
EDP03322
Predicted protein (811 aa)
     
  0.992
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
    0.992
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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