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SEC13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SEC13" - COP-II coat subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC13COP-II coat subunit (299 aa)    
Predicted Functional Partners:
SEC31
COP-II coat subunit (1313 aa)
     
  0.998
SEC23A
COP-II coat subunit (762 aa)
     
  0.997
SEC24A
COP-II coat subunit (820 aa)
     
  0.995
EDP06719
Predicted protein (151 aa)
     
  0.989
SEC24C
COP-II coat subunit (825 aa)
     
  0.986
SEC13L
COP-II coat subunit, nucleoporin (338 aa)
     
0.986
SEC24B
COP-II coat subunit (1080 aa)
     
  0.982
SAR1
Sar-type small GTPase (192 aa)
     
 
  0.959
EDP07241
Cmp24/gp25L/p24 family protein (212 aa)
     
  0.876
EDP02014
Predicted protein (604 aa)
       
 
  0.825
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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