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LST8 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LST8" - TOR kinase binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LST8TOR kinase binding protein (315 aa)    
Predicted Functional Partners:
TOR1
Target of rapamycin, growth-regulatory PI3K-like protein kinase (1696 aa)
     
  0.983
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
       
  0.982
EDO97620
TOR binding partner raptor (289 aa)
     
  0.922
S6K1
Ribosomal protein S6 kinase (319 aa)
       
  0.917
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
  0.892
EDP06932
ATM/ATR-like kinase (4723 aa)
     
  0.892
ATR1
DNA damage-sensing protein kinase (3304 aa)
       
  0.888
PIK1
Phosphatidylinositol 4-kinase (589 aa)
       
  0.888
RPS29
Ribosomal protein S29 (56 aa)
           
  0.760
PRPS6
Plastid ribosomal protein S6 (171 aa)
           
  0.752
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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