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EDO98187 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98187" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98187Predicted protein (278 aa)    
Predicted Functional Partners:
UBC1
Ubiquitin activating enzyme E1 (411 aa)
     
 
  0.988
EDO97610
Predicted protein (176 aa)
       
  0.969
APG3
Autophagy protein (306 aa)
     
  0.894
APG8
Autophagy protein (134 aa)
       
  0.878
EDP09237
Predicted protein (192 aa)
       
  0.837
UBC3
E2 ubiquitin-conjugating enzyme (163 aa)
       
  0.837
UBC4
E2 ubiquitin-conjugating-like enzyme (159 aa)
       
  0.837
UBQ4
Ubiquitin (242 aa)
     
  0.831
UBQ2
Bi-ubiquitin (153 aa)
       
  0.823
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.819
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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