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EDO98197 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98197" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98197Predicted protein (268 aa)    
Predicted Functional Partners:
USE1
Qc-SNARE protein, USE1 family (482 aa)
     
        0.659
EDO96254
Predicted protein (820 aa)
     
        0.600
EDP04430
Predicted protein (123 aa)
     
        0.539
EDO96539
Ankyrin-repeat protein (749 aa)
     
        0.519
EDP04794
Hypothetical protein (749 aa)
     
        0.516
EDP06607
Predicted protein (939 aa)
     
        0.514
EDP04077
Predicted protein (63 aa)
     
        0.513
EDP02816
Predicted protein (804 aa)
     
        0.512
STPK5
Serine/threonine protein kinase 5 (618 aa)
     
        0.510
EDP06154
Predicted protein (130 aa)
     
        0.509
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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