STRINGSTRING
EDO98264 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98264" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98264Predicted protein (1198 aa)    
Predicted Functional Partners:
EDP00601
FAB-like protein, FYVE-domain PI-3,4-kinase (1269 aa)
     
  0.987
EDO98861
Predicted protein (658 aa)
     
  0.956
EDP08917
Predicted protein (811 aa)
     
  0.618
EDP03975
Inositol polyphosphate phosphatase-like protein (685 aa)
     
  0.618
EDP03619
Inositol polyphosphate phosphatase (1217 aa)
     
  0.618
EDO97507
Predicted protein (115 aa)
     
  0.618
AP4B4
Beta-4-adaptin (858 aa)
     
  0.566
AP1B1
Hypothetical protein (186 aa)
     
  0.555
COPB1
Beta-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (959 aa)
     
  0.554
EDO99970
Predicted protein (591 aa)
     
  0.544
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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