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EDO98338 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98338" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98338Predicted protein (991 aa)    
Predicted Functional Partners:
EDO98302
Predicted protein (566 aa)
     
        0.553
EDP03231
Predicted protein (1072 aa)
     
        0.524
EDP04331
Histone acetyltransferase, type b catalytic subunit (444 aa)
     
        0.520
EDP08870
Predicted protein (337 aa)
     
        0.518
APC6
Anaphase promoting complex subunit 6 (127 aa)
     
        0.517
EDO99294
Predicted protein (479 aa)
     
        0.514
EDP09858
Bromodomain protein (676 aa)
     
        0.510
EDP07806
Predicted protein (392 aa)
     
        0.506
TUE
Epsilon tubulin (478 aa)
     
        0.506
EDO99611
Hypothetical protein (1043 aa)
     
        0.502
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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