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LHCBM1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LHCBM1" - Chlorophyll a-b binding protein of LHCII in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHCBM1Chlorophyll a-b binding protein of LHCII (266 aa)    
Predicted Functional Partners:
LHCBM3
Light-harvesting complex II chlorophyll a-b binding protein M3 (257 aa)
     
 
0.964
LHCBM2
Light-harvesting protein of photosystem II (249 aa)
     
 
0.936
LHCB5
Minor chlorophyll a-b binding protein of photosystem II (289 aa)
     
 
0.931
PSBP1
Oxygen-evolving enhancer protein 2 of photosystem II (282 aa)
     
 
    0.928
LHCBM7
Chlorophyll a-b binding protein of LHCII (249 aa)
     
 
0.927
LHCBM4
Chloropyll a-b binding protein of LHCII (254 aa)
     
 
0.916
LHCBM6
Chloropyll a-b binding protein of LHCII type I, chloroplast precursor (253 aa)
     
 
0.914
LHCBM5
Chlorophyll a-b binding protein of LHCII (268 aa)
     
 
0.912
LHCBM8
Chlorophyll a-b binding protein of LHCII (254 aa)
     
 
0.905
PSBR
10 kDa photosystem II polypeptide (121 aa)
     
 
    0.905
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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