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EDO98362 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98362" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98362Predicted protein (136 aa)    
Predicted Functional Partners:
EDP00626
Predicted protein (178 aa)
     
        0.660
EDO99394
Predicted protein (268 aa)
     
        0.589
EDO97885
Predicted protein (497 aa)
     
        0.565
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
        0.558
EDP07168
Predicted protein (231 aa)
     
        0.533
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
        0.521
EDO99796
Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)
     
        0.516
EDO99461
Predicted protein (347 aa)
     
        0.510
EDP00627
Predicted protein (513 aa)
     
        0.509
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
        0.506
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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