STRINGSTRING
EDO98401 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98401" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98401Predicted protein (410 aa)    
Predicted Functional Partners:
EDP02506
ATP-dependent DNA helicase (897 aa)
     
  0.851
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
     
  0.839
EDP08693
Predicted protein (1357 aa)
     
  0.798
EDP05330
Predicted protein (540 aa)
     
 
    0.793
FEN1
Nuclease, Rad2 family; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as [...] (396 aa)
     
 
    0.775
EDP06938
Predicted protein (54 aa)
     
  0.753
RFC4
DNA replication factor C complex subunit 4 (332 aa)
     
 
  0.752
RFC5
DNA replication factor C complex subunit 5 (356 aa)
     
 
  0.747
POLD2
DNA polymerase delta small subunit (431 aa)
     
 
    0.746
EDP05379
Predicted protein (73 aa)
     
 
  0.741
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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