STRINGSTRING
EDO98414 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98414" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98414Predicted protein (314 aa)    
Predicted Functional Partners:
TRK1
Transketolase (718 aa)
     
  0.725
TAL1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (382 aa)
       
  0.684
TAL2
Transaldolase (399 aa)
       
  0.684
FSA1
fructose-6-P aldolase (279 aa)
       
  0.684
HSP90B
Heat shock protein 90B (768 aa)
       
      0.601
HSP90A
Heat shock protein 90A (705 aa)
       
      0.601
HSP90C
Heat shock protein 90C (810 aa)
       
      0.601
ACLB1
ATP citrate lyase, subunit B (534 aa)
         
  0.560
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
         
  0.539
PGI1
Phosphoglucose isomerase (646 aa)
         
  0.535
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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