STRINGSTRING
EDO98431 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98431" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98431Predicted protein (86 aa)    
Predicted Functional Partners:
EDO98148
Predicted protein (96 aa)
   
  0.924
EDP01005
Predicted protein (594 aa)
   
  0.921
EDO95996
MSH2-like protein (221 aa)
   
  0.921
MSH1
DNA mismatch repair MutS protein (1041 aa)
   
  0.921
EDO99899
Predicted protein (86 aa)
   
  0.921
EDP02391
Predicted protein (317 aa)
   
  0.907
EDO98728
Predicted protein (111 aa)
   
  0.907
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
   
 
  0.904
MLH1
Mismatch repair protein (1007 aa)
     
  0.854
RECA
Chloroplast RecA recombination protein (415 aa)
   
  0.830
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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