STRINGSTRING
EDO98433 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98433" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98433Predicted protein (408 aa)    
Predicted Functional Partners:
EDP09724
Predicted protein (830 aa)
     
        0.527
EDP02436
Predicted protein (570 aa)
     
        0.520
PUS2
tRNA pseudouridine synthase (239 aa)
     
        0.518
EDO99647
Predicted protein (477 aa)
     
        0.511
EDP09064
Histone methyltransferase (484 aa)
     
        0.505
EDP03852
Predicted protein (500 aa)
     
        0.504
EDO98845
Predicted protein (471 aa)
     
        0.504
EDP09059
Predicted amino acid kinase (344 aa)
     
        0.502
EDP04717
Cdc48-like protein (685 aa)
     
        0.491
EDP04367
Predicted protein (432 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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