STRINGSTRING
EDO98490 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98490" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98490Predicted protein (476 aa)    
Predicted Functional Partners:
EDP07463
Paf1 complex component (396 aa)
     
  0.960
EDP00621
Paf1 complex component (502 aa)
     
  0.960
EDO97979
Predicted protein (626 aa)
     
 
  0.931
EDP04357
Paf1 complex component (973 aa)
     
  0.919
EDO98741
Paf1 complex component (106 aa)
     
  0.915
EDO97925
Predicted protein (394 aa)
     
 
  0.806
EDP09795
Global transcription factor (1188 aa)
       
    0.745
EDP03315
Paf1 complex component (656 aa)
       
  0.730
EDP01779
Predicted protein (1143 aa)
       
  0.722
MTR4
DEAD-box family ATP dependent helicase (945 aa)
       
  0.722
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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