STRINGSTRING
AGG2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AGG2" - Membrane protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG2Membrane protein (177 aa)    
Predicted Functional Partners:
AGG3
Flagellar flavodoxin (201 aa)
           
  0.780
FAP178
Flagellar associated protein (192 aa)
           
  0.711
FAP266
Flagellar associated protein (181 aa)
           
  0.711
VFL2
Centrin (169 aa)
     
   
  0.527
EDP06235
SWI2/SNF2-like protein (1286 aa)
           
  0.499
EDP08042
Flavodoxin (272 aa)
           
  0.468
D1BLIC
Cytoplasmic dynein 1b light intermediate chain, D1bLIC; Functions as a motor for intraflagellar retrograde transport. Functions in flagellar biogenesis (427 aa)
           
  0.429
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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