STRINGSTRING
EDO98580 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98580" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98580Predicted protein (560 aa)    
Predicted Functional Partners:
EDP06485
RNA binding rRNA processing protein (1280 aa)
     
        0.651
EDP02992
Predicted protein (235 aa)
     
        0.651
EDP00683
Predicted protein (516 aa)
     
        0.651
NOP14
Nucleolar protein (1137 aa)
     
        0.649
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.635
EDP03163
Predicted protein (514 aa)
     
        0.615
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
     
        0.613
RPA1
DNA-directed RNA polymerase I subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1515 aa)
     
        0.609
EDP03935
Predicted protein (304 aa)
     
        0.605
EDP08920
Predicted protein (523 aa)
     
        0.601
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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