STRINGSTRING
OXA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"OXA1" - Protein in OXA1/oxaA family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXA1Protein in OXA1/oxaA family (214 aa)    
Predicted Functional Partners:
EDP01183
Predicted protein (657 aa)
     
        0.659
EDP07530
Predicted protein (565 aa)
     
        0.656
EDP07767
Predicted protein (498 aa)
     
        0.651
EDP06658
Predicted protein (863 aa)
     
        0.651
EDP00483
Predicted protein (295 aa)
     
        0.651
EDP07214
Predicted protein (814 aa)
     
        0.649
EDP02060
Predicted protein (392 aa)
     
        0.602
EDP05380
Predicted protein (203 aa)
     
        0.595
EDO96781
SWI/SNF chromatin remodeling complex component (962 aa)
     
        0.585
EDP01403
Predicted protein (513 aa)
     
        0.582
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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