STRINGSTRING
EIF4A3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EIF4A3" - Eukaryotic initiation factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF4A3Eukaryotic initiation factor (392 aa)    
Predicted Functional Partners:
RBM8A
RNA binding motif protein (144 aa)
     
  0.973
MGO1
Mago nashi-like protein (148 aa)
     
  0.911
PNP1
Polyribonucleotide phosphorylase PNPase (599 aa)
   
 
  0.781
UPF3
UPF3 protein (371 aa)
     
  0.778
REF1
RNA export factor (137 aa)
     
  0.753
RPL7
Ribosomal protein L7 (266 aa)
     
  0.752
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
  0.747
RPL5
Ribosomal protein L5 (293 aa)
     
  0.738
EDP05831
Predicted protein (156 aa)
     
  0.733
SPL5
pre-mRNA-splicing factor (488 aa)
     
  0.730
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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