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PYR4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PYR4" - Dihydropryrimidine dehydrogenase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYR4Dihydropryrimidine dehydrogenase (387 aa)    
Predicted Functional Partners:
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
  0.995
EDO98552
Predicted protein (381 aa)
   
 
  0.983
EDP07748
Predicted protein (219 aa)
   
  0.920
DAL1
Allantoinase (512 aa)
   
  0.919
NIT1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (882 aa)
   
  0.915
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
  0.913
PYR2
Aspartate carbamoyltransferase (272 aa)
   
 
  0.896
CBR1
NADH-cytochrome b5 reductase (280 aa)
   
  0.894
EDO98199
Predicted protein (321 aa)
     
  0.894
ARH1
NADP adrenodoxin-like ferredoxin reductase (525 aa)
   
  0.856
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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