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EDO98687 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98687" - Small arf-related GTPase ARFRP1 in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98687Small arf-related GTPase ARFRP1 (201 aa)    
Predicted Functional Partners:
EDP06524
Membrane protein (209 aa)
     
  0.695
COG8
Component of oligomeric golgi complex 8 (546 aa)
     
  0.578
RABH1
Small rab-related GTPase (211 aa)
     
  0.576
VPS52
Subunit of GARP complex (657 aa)
     
    0.571
EDP01844
Predicted protein (890 aa)
     
 
    0.545
VPS29
Subunit of retromer complex (188 aa)
     
      0.536
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
  0.524
COG7
Component of oligomeric golgi complex 7 (758 aa)
     
 
    0.517
NOT2
Predicted protein (721 aa)
     
        0.510
EDP03849
Predicted protein (166 aa)
   
 
  0.509
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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