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RBL8 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RBL8" - Rhomboid-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBL8Rhomboid-like protein (406 aa)    
Predicted Functional Partners:
FUM1
Fumarate hydratase (589 aa)
   
   
  0.693
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
     
   
  0.616
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
     
   
  0.574
EDP06649
Predicted protein (353 aa)
   
        0.542
RBL4
Rhomboid-like protease (283 aa)
   
     
  0.528
EXO70
Component of the exocyst complex (803 aa)
     
   
  0.483
EDP04036
Predicted protein (203 aa)
   
        0.480
EDP08013
Predicted protein (266 aa)
     
        0.475
EDP04964
Metalloprotease (391 aa)
   
      0.445
EDO99453
Predicted protein (240 aa)
     
      0.419
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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