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AMI1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AMI1" - Formamidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMI1Formamidase (455 aa)    
Predicted Functional Partners:
NII1
Nitrite reductase (589 aa)
         
  0.927
GLN2
Glutamine synthetase (380 aa)
       
  0.907
GLN4
Glutamine synthetase (577 aa)
       
  0.907
GLN1
Glutamine synthetase (382 aa)
   
 
  0.907
GLN3
Glutamine synthetase (375 aa)
       
  0.905
GDH1
Glutamate dehydrogenase (448 aa)
         
    0.900
GDH2
Glutamate dehydrogenase (450 aa)
         
    0.900
PYC1
Pyruvate carboxylase (1165 aa)
     
 
  0.844
MDH2
Malate dehydrogenase (353 aa)
         
  0.815
MDH4
Malate dehydrogenase (373 aa)
         
  0.815
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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