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SYP3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SYP3" - Qa-SNARE protein, Sed5/Syntaxin5-family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP3Qa-SNARE protein, Sed5/Syntaxin5-family (339 aa)    
Predicted Functional Partners:
MEMB1
Qb-SNARE protein, Bos1/Membrin family (224 aa)
     
  0.998
GOS1
Qb-SNARE protein, Gos1/GS28-family (258 aa)
     
  0.998
SEC22
R-SNARE protein, Sec22-family (219 aa)
     
  0.997
YKT6
R-SNARE protein, YKT6-family (202 aa)
     
  0.997
BET1
Qc-SNARE protein, Bet1/mBET1 family (110 aa)
     
  0.997
SLY1
SM/Sec1-family protein (640 aa)
     
  0.992
SNAPA1
alpha-SNAP (303 aa)
     
  0.979
VTI1
Qb-SNARE protein, VTI1-family (223 aa)
     
 
  0.978
SYP8
Qa-SNARE protein, Ufe1/Syntaxin 18 family (333 aa)
     
 
  0.963
SYP6
Qc-SNARE protein, Tlg1/Syntaxin 6-family (225 aa)
     
 
  0.961
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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