STRINGSTRING
EDO98779 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98779" - MRG family protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98779MRG family protein (207 aa)    
Predicted Functional Partners:
EDO97987
Predicted protein (738 aa)
     
 
  0.983
EDP01523
Predicted protein (366 aa)
     
  0.983
EDP01544
MYST family histone acetyltransferase (415 aa)
     
  0.969
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
       
  0.968
EDP08877
Histone acetyltransferase (279 aa)
       
  0.968
EDP06932
ATM/ATR-like kinase (4723 aa)
     
  0.961
EDP03314
Predicted protein (578 aa)
     
  0.958
EDP04619
Predicted protein (274 aa)
       
  0.950
EDO98539
Histone deacetylase (339 aa)
     
  0.947
TF2F
Transcription factor IIF (206 aa)
     
  0.939
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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