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EDO98837 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98837" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98837Predicted protein (475 aa)    
Predicted Functional Partners:
EDP09691
Predicted protein (513 aa)
     
 
  0.983
EDP01841
Sin3 complex component (136 aa)
       
      0.626
EDO95996
MSH2-like protein (221 aa)
     
      0.561
SPL4
Splicing factor-like protein (379 aa)
     
        0.557
EDP01005
Predicted protein (594 aa)
     
      0.550
SET3
Histone methyltransferase (957 aa)
     
   
  0.508
EDP01186
Predicted protein (710 aa)
     
        0.507
EDP07443
Predicted protein (283 aa)
     
        0.504
EDP09592
Predicted protein (698 aa)
     
        0.502
TOP1
DNA topoisomerase I (586 aa)
     
      0.499
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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