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TRM5 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TRM5" - tRNA-(N1G37) methyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM5tRNA-(N1G37) methyltransferase (400 aa)    
Predicted Functional Partners:
NCPR1
ADPH--cytochrome P450 reductase-related protein (480 aa)
   
   
  0.950
EDP07168
Predicted protein (231 aa)
   
 
  0.949
TRM4
tRNA-(M5C) methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (392 aa)
     
   
  0.934
TRM7
Putative tRNA (cytidine(32)/guanosine(34)-2’-O)-methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (323 aa)
     
   
  0.926
EDP03720
Predicted protein (154 aa)
   
   
  0.919
EDP03014
Predicted protein (343 aa)
     
   
  0.890
EDP01550
Predicted protein (373 aa)
     
   
  0.865
EDO97028
Predicted protein (413 aa)
     
   
  0.865
EDP03526
Predicted protein; tRNA-dihydrouridine synthase (283 aa)
     
   
  0.859
EDP04195
Predicted protein (365 aa)
     
   
  0.859
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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