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METC protein (Chlamydomonas reinhardtii) - STRING interaction network
"METC" - Cystathionine beta-lyase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METCCystathionine beta-lyase (517 aa)    
Predicted Functional Partners:
METH1
Cobalamin-dependent methionine synthase (1242 aa)
       
  0.993
METH2
Cobalamin-dependent methionine synthase (1297 aa)
       
  0.993
OASTL3
Cysteine synthase (387 aa)
   
  0.977
OASTL4
Cysteine synthase (359 aa)
 
  0.977
OASTL1
Cysteine synthase (414 aa)
 
  0.977
OASTL2
Cysteine synthase (382 aa)
 
  0.975
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
   
 
  0.956
TST
Thiosulfate sulfurtransferase (310 aa)
 
 
  0.947
SAH1
S-Adenosyl homocysteine hydrolase (483 aa)
     
 
  0.943
CGS1
Cystathionine gamma-synthase (466 aa)
   
 
0.917
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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