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SQD3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SQD3" - Sulfolipid synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SQD3Sulfolipid synthase (395 aa)    
Predicted Functional Partners:
SQD1
UDP-sulfoquinovose synthase (479 aa)
   
 
  0.971
EDP09106
Predicted protein (377 aa)
       
  0.930
LIPG2
Triacylglycerol lipase (390 aa)
       
  0.908
KDG3
Diacylglycerol kinase (186 aa)
     
 
    0.900
KDG1
Diacylglycerol kinase (879 aa)
     
 
    0.900
LCA1
Lecithin-cholesterol acyltransferase (856 aa)
         
    0.900
EDP06642
Predicted protein (413 aa)
         
    0.900
EDP05180
Predicted protein (346 aa)
         
    0.900
EDP04893
Predicted protein (440 aa)
         
    0.900
CGLD24
Diacylglycerol acyl transferase (327 aa)
         
    0.900
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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