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EDO98904 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98904" - Ribosome biogenesis pescadillo-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98904Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)    
Predicted Functional Partners:
EDP06418
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
  0.999
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
  0.999
EDP00663
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (179 aa)
     
 
  0.999
NGB1
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
 
  0.999
NGB2
Nucleolar GTP-binding protein (189 aa)
     
 
  0.999
EDP08560
Predicted protein (223 aa)
     
  0.998
EDP02318
Predicted protein (1017 aa)
     
 
  0.998
LCI30
low-CO2-inducible protein (260 aa)
     
 
  0.998
EDP03165
Predicted protein (330 aa)
     
 
  0.998
EDO99737
Predicted protein (168 aa)
     
 
  0.998
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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