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CGK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGK1" - cGMP-dependent protein kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGK1cGMP-dependent protein kinase (305 aa)    
Predicted Functional Partners:
EDO98870
Predicted protein (299 aa)
   
0.878
EDP03411
Predicted protein (252 aa)
   
0.870
EDP05763
Predicted protein (206 aa)
   
0.868
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
       
 
  0.830
CYG49
Guanylate cyclase (185 aa)
   
  0.820
CYG22
Guanylate cyclase (181 aa)
   
  0.820
CYG20
Guanylate cyclase (179 aa)
   
  0.820
CYG47
Guanylate cyclase (131 aa)
   
  0.820
CYG44
Guanylate cyclase (1834 aa)
   
  0.820
CYG54
Guanylate cyclase (178 aa)
   
  0.820
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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