STRINGSTRING
EDO98953 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98953" - DNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98953DNA binding protein (661 aa)    
Predicted Functional Partners:
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.973
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
 
  0.969
RAD50
DNA repair protein (1410 aa)
     
  0.964
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
     
 
  0.956
EDP04113
Predicted protein (499 aa)
     
 
  0.942
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
     
 
  0.932
EDP06099
ATP-dependent DNA helicase (330 aa)
     
 
  0.924
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
     
  0.921
EDP05379
Predicted protein (73 aa)
     
 
  0.916
EDO99592
Predicted protein (1384 aa)
     
  0.915
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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