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SRP23 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP23" - Nuclear SR-like RNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP23Nuclear SR-like RNA binding protein (194 aa)    
Predicted Functional Partners:
EDP06893
Predicted protein (77 aa)
   
 
  0.697
EDP02454
Glycine-rich RNA-binding protein (165 aa)
   
 
  0.693
PRP38
pre-mRNA splicing factor (284 aa)
       
  0.670
EDP09275
Predicted protein (73 aa)
   
   
    0.657
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
0.647
RBM8A
RNA binding motif protein (144 aa)
   
   
  0.609
EDO99010
Predicted protein (80 aa)
   
 
  0.585
EDP08396
U2 snRNP auxiliary factor, small subunit (273 aa)
       
  0.582
EDP09012
Predicted protein (86 aa)
   
 
 
  0.580
RSZ22
SR protein factor (200 aa)
       
  0.579
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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