STRINGSTRING
EDO98991 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98991" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98991Predicted protein (3962 aa)    
Predicted Functional Partners:
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.476
EDO96559
Predicted protein (5850 aa)
     
        0.429
EDP03227
Predicted protein (5080 aa)
     
        0.419
EDP02344
Predicted protein (3185 aa)
     
        0.410
EDO98268
Predicted protein (346 aa)
     
        0.406
EDO97473
Predicted protein (1082 aa)
     
        0.406
EDO97268
Predicted protein (2131 aa)
     
        0.402
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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