STRINGSTRING
EDO99007 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99007" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99007Predicted protein (302 aa)    
Predicted Functional Partners:
EDO97213
Predicted protein (748 aa)
     
        0.545
EDP00678
Predicted protein (488 aa)
     
        0.502
TGD1
Lipid transfer machine permease (245 aa)
     
        0.475
EDP04195
Predicted protein (365 aa)
     
        0.468
MTP5
CDF transporter, membrane protein (472 aa)
     
        0.428
ACK2
Acetate kinase (405 aa)
     
        0.425
EDP07227
Predicted protein (231 aa)
     
        0.424
EDO96767
Predicted protein (593 aa)
     
        0.422
EDP04662
Predicted protein (596 aa)
     
        0.420
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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