STRINGSTRING
EDO99025 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99025" - EMP/nonaspanin domain family protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99025EMP/nonaspanin domain family protein (598 aa)    
Predicted Functional Partners:
VPS24
Subunit of the ESCRT-III complex (220 aa)
     
  0.614
VPS2A
Subunit of the ESCRT-III complex (223 aa)
     
  0.577
VPS2B
Subunit of the ESCRT-III complex (215 aa)
     
  0.577
VPS20
Subunit of ESCRT-III complex (232 aa)
       
  0.549
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
   
  0.489
COG1
Component of oligomeric golgi complex 1 (1324 aa)
     
   
  0.455
COG7
Component of oligomeric golgi complex 7 (758 aa)
     
   
  0.454
COG8
Component of oligomeric golgi complex 8 (546 aa)
     
   
  0.453
COPG1
Gamma-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (883 aa)
     
   
  0.453
VPS60
Subunit of the ESCRT-III complex (166 aa)
     
  0.419
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (15%) [HD]