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EDO99040 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99040" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99040Predicted protein (379 aa)    
Predicted Functional Partners:
VPS5B
Subunit of retromer complex (550 aa)
     
        0.624
EDP00727
Predicted protein (953 aa)
     
        0.570
EDP03975
Inositol polyphosphate phosphatase-like protein (685 aa)
     
        0.518
VPS37
Subunit of the ESCRT-I complex (342 aa)
     
        0.475
EDO99614
Predicted protein (351 aa)
     
        0.430
EDO96406
Predicted protein (279 aa)
     
        0.418
EDP04964
Metalloprotease (391 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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