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EDO99041 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99041" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99041Predicted protein (244 aa)    
Predicted Functional Partners:
EDP03128
Predicted protein (629 aa)
     
        0.516
SEC24C
COP-II coat subunit (825 aa)
     
        0.486
EDO96309
Predicted protein (319 aa)
     
        0.478
EDP07928
Predicted protein (586 aa)
     
        0.475
EDP05741
Predicted protein (439 aa)
     
        0.475
EDP04997
Potential GTPase activation protein (1138 aa)
     
        0.425
LSP1
Signal transducer for phototaxis (716 aa)
     
        0.424
EDP06074
Histone deacetylase (312 aa)
     
        0.410
TML1
R-SNARE protein, tomsyn-like family (1204 aa)
     
        0.410
EDP04540
Metal-dependent phosphohydrolase (627 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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