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EDO99042 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99042" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99042Predicted protein (252 aa)    
Predicted Functional Partners:
PUS1
tRNA pseudouridine synthase (382 aa)
   
        0.648
EDO96470
Predicted protein (460 aa)
   
        0.619
EDO98458
Histone methyltransferase (711 aa)
     
        0.603
EDP02462
Predicted protein (860 aa)
     
        0.532
EDP09754
Predicted protein (284 aa)
     
        0.521
DEGO
DegP-type protease-like protein (632 aa)
     
        0.519
EDO98845
Predicted protein (471 aa)
     
        0.518
EDP04963
Protein tyrosine kinase (251 aa)
     
        0.515
EDP02680
Predicted protein (190 aa)
     
        0.513
EDP03656
Predicted protein (137 aa)
     
        0.511
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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