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EDO99060 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99060" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99060Predicted protein (334 aa)    
Predicted Functional Partners:
EDP04963
Protein tyrosine kinase (251 aa)
   
  0.965
EDP09326
Predicted protein (176 aa)
       
  0.919
TRM5
tRNA-(N1G37) methyltransferase (400 aa)
 
 
   
  0.805
EDP06649
Predicted protein (353 aa)
   
   
  0.766
EDO97910
Predicted protein (340 aa)
   
 
  0.727
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.706
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
   
   
  0.706
SERRS2
Seryl-trna synthetase (472 aa)
   
 
  0.694
TRZ4
RNase Z-like protein (730 aa)
   
        0.687
SERRS1
Seryl tRNA synthetase (120 aa)
   
 
  0.683
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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