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EDO99160 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99160" - Predicted protein in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99160Predicted protein (465 aa)    
Predicted Functional Partners:
GIDA1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme (625 aa)
 
  0.961
GIDB1
Methyltransferase (258 aa)
   
   
  0.796
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.777
EDP03710
Predicted protein (365 aa)
 
 
  0.601
TRZ2
Beta-lactamase protein (1514 aa)
     
        0.592
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
   
   
  0.588
TOP3
DNA gyrase subunit B-like protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (649 aa)
   
   
  0.560
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
   
  0.554
ALB3.1
Inner membrane ALBINO3-like protein 1 (495 aa)
   
 
  0.551
EDP03184
Predicted protein (190 aa)
   
 
  0.551
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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