STRINGSTRING
ANK27 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ANK27" - Protein with ankyrin repeats in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK27Protein with ankyrin repeats (304 aa)    
Predicted Functional Partners:
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.855
RPT2
26S proteasome regulatory subunit (443 aa)
     
  0.726
RPN10
26S proteasome regulatory subunit (245 aa)
     
  0.718
RPN1
26S proteasome regulatory subunit (895 aa)
     
    0.718
EDP03665
Predicted protein (400 aa)
     
  0.717
RPT1
26S proteasome regulatory subunit (427 aa)
     
  0.716
RPT6
26S proteasome regulatory subunit (294 aa)
     
  0.716
RPN3
26S proteasome regulatory subunit (488 aa)
     
  0.715
RPT4
26S proteasome regulatory subunit (399 aa)
       
  0.709
RCA1
Rubisco activase (408 aa)
       
  0.709
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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