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EDO99187 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99187" - isoleucyl-tRNA synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99187isoleucyl-tRNA synthetase (902 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
   
  0.986
EDP06649
Predicted protein (353 aa)
   
 
  0.964
EDP09046
Predicted protein (57 aa)
   
  0.937
EDP05538
Predicted protein (526 aa)
   
  0.936
EDP06262
Predicted protein (1097 aa)
   
   
  0.926
EDP01438
Predicted protein (589 aa)
   
  0.922
EDP01101
Predicted protein (879 aa)
   
 
  0.921
PRORS1
Organellar class II aminoacyl tRNA synthetase (580 aa)
   
  0.916
EDO97327
Predicted protein (403 aa)
   
  0.910
EDO97326
Predicted protein (246 aa)
   
  0.904
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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